NIAB - National Institute of Agricultural Botany

Assay information: Vf_Mt8g102920_001

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Narrative UPF0546 membrane protein (AHRD V1 ***- Q54ZG7); contains Interpro domain(s) IPR018908 Uncharacterised protein family UPF0546 chr08_pseudomolecule_IMGAG_V3.5 30088851-30088151 E EGN_Mt100125 20100825
References Webb, A., Cottage, A., Wood, T., Khamassi, K., Hobbs, D., Gostkiewicz, K., White, M., Khazaei, H., Ali, M., Street, D., Duc, G., Stoddard, F., Maalouf, F., Ogbonnaya, F. C., Link, W., Thomas, J. and O'Sullivan, D. M. (2015) A SNP-based consensus genetic map for synteny-based trait targeting in faba bean (Vicia faba L.). Plant Biotechnology Journal. ISSN 1467-7652 (In Press)
Map NV13 x Memphis
Linkage Group 10
Chromosome unknown
cM position 0.252824
Assay ID
Assay Name Vf_Mt8g102920_001
Reference Allele Sequences
Sequence ID Allele Phenotype
A:A resistant
C:C susceptible
Polymorphism sequence TATGGGGCGCCACCAACGCTATCATGCGCCGTGGTGCACTTCTTTGGGAYGAAGC
ASTCAAAGCCTCATCATCAAAACAAYCACATCCTC[M]ATCAACAAATCTCGCTC
GAARAATCGCATTCTCTCTACGCAACTGGYTTAAGCTTCTCTCCATTTGGCAATA
CTCGATCCCCTTTCTCGTTAACCTCTCC
Reference allele sequence alignment
Validation plot
Genotype data