NIAB - National Institute of Agricultural Botany

Assay information: Vf_Mt4g103550_001

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Narrative SNF1-related protein kinase regulatory subunit gamma 1 (AHRD V1 ***- Q8LBB2); contains Interpro domain(s) IPR000644 Cystathionine beta-synthase, core chr04_pseudomolecule_IMGAG_V3.5 35834450-35831579 E EGN_Mt100125 20100825
References Webb, A., Cottage, A., Wood, T., Khamassi, K., Hobbs, D., Gostkiewicz, K., White, M., Khazaei, H., Ali, M., Street, D., Duc, G., Stoddard, F., Maalouf, F., Ogbonnaya, F. C., Link, W., Thomas, J. and O'Sullivan, D. M. (2015) A SNP-based consensus genetic map for synteny-based trait targeting in faba bean (Vicia faba L.). Plant Biotechnology Journal. ISSN 1467-7652 (In Press)
Map NV13 x Memphis
Linkage Group 7
Chromosome unknown
cM position 64.873
Assay ID
Assay Name Vf_Mt4g103550_001
Reference Allele Sequences
Sequence ID Allele Phenotype
T:T resistant
C:C susceptible
Polymorphism sequence AACTTTATAAGAACACCAAGGTTGTTTTGCTATGTCAACCTTTCTTTGAAGTGAC
TCTTATTCGAGCTGCTACTTTGTTTGTATTTTGTTGTATTAGT[Y]GCTGACTTT
TTCGTAAACAGGTTCGGGATATCTCTGGGACATTCCGATGGGCTCCGTTTCTTGC
TTTGGAGAGATCAAACTCTTTTCTAACCATGCTCTTGT
Reference allele sequence alignment
Validation plot
Genotype data