NIAB - National Institute of Agricultural Botany

Assay information: Vf_Mt3g062540_001

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Narrative Root phototropism protein 2 (AHRD V1 ***- Q682S0); contains Interpro domain(s) IPR004249 NPH3 chr03_pseudomolecule_IMGAG_V3.5 19749128-19746598 F EGN_Mt100125 20100825
References Webb, A., Cottage, A., Wood, T., Khamassi, K., Hobbs, D., Gostkiewicz, K., White, M., Khazaei, H., Ali, M., Street, D., Duc, G., Stoddard, F., Maalouf, F., Ogbonnaya, F. C., Link, W., Thomas, J. and O'Sullivan, D. M. (2015) A SNP-based consensus genetic map for synteny-based trait targeting in faba bean (Vicia faba L.). Plant Biotechnology Journal. ISSN 1467-7652 (In Press)
Map NV13 x Memphis
Linkage Group 2
Chromosome unknown
cM position 79.2196
Assay ID
Assay Name Vf_Mt3g062540_001
Reference Allele Sequences
Sequence ID Allele Phenotype
A:A resistant
G:G susceptible
Polymorphism sequence TGGTGGACGGAGGAACTAGCTGTTCTCGACATCAAGTTCTTCGGGAGAGCCATCA
GTGGTATGAAACAGCGCGGCGCCAAGTCTCCAACCATTGCAAGC[R]CACTGATT
ACCTACACAGAGCGATCTCTCCAAGAGCTAGTTCGGAATCACTCCGGCAATGGAA
TCCGATCTTCAGGTTACCACGATTCAGA
Reference allele sequence alignment
Validation plot
Genotype data