NIAB - National Institute of Agricultural Botany

Assay information: Vf_Mt2g012470_001

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Narrative Lysine/histidine transporter (AHRD V1 ***- B9MVJ1_POPTR); contains Interpro domain(s) IPR013057 Amino acid transporter, transmembrane chr02_pseudomolecule_IMGAG_V3.5 3286685-3291384 E EGN_Mt100125 20100825
References Webb, A., Cottage, A., Wood, T., Khamassi, K., Hobbs, D., Gostkiewicz, K., White, M., Khazaei, H., Ali, M., Street, D., Duc, G., Stoddard, F., Maalouf, F., Ogbonnaya, F. C., Link, W., Thomas, J. and O'Sullivan, D. M. (2015) A SNP-based consensus genetic map for synteny-based trait targeting in faba bean (Vicia faba L.). Plant Biotechnology Journal. ISSN 1467-7652 (In Press)
Map NV13 x Memphis
Linkage Group 1
Chromosome unknown
cM position 398.715
Assay ID
Assay Name Vf_Mt2g012470_001
Reference Allele Sequences
Sequence ID Allele Phenotype
G:G resistant
A:A susceptible
Polymorphism sequence GAGGGGAAACCATGAAACTGTTTTTNCAAATWGTTTGYGGTCCAACATGCACCTC
AAATCCTTTAACCACAGTGGAGTGGTACCTTGTTTTCACTTCTCT[R]TCCATTG
TTCTTTCTCAGCTTCCGAACCTCAATTCAATAGCAGGACTTTCACTAATAGGGGC
TGTTACAGCCATTACTTACTCTACCATGGTTTGGGT
Reference allele sequence alignment
Validation plot
Genotype data