NIAB - National Institute of Agricultural Botany

Assay information: Vf_Mt5g011550_001

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Narrative ATP-dependent Clp protease ATP-binding subunit clpA homolog (AHRD V1 *-*- Q9TM05); contains Interpro domain(s) IPR004176 Clp, N-terminal chr05_pseudomolecule_IMGAG_V3.5 3115190-3111822 F EGN_Mt100125 20100825
References Webb, A., Cottage, A., Wood, T., Khamassi, K., Hobbs, D., Gostkiewicz, K., White, M., Khazaei, H., Ali, M., Street, D., Duc, G., Stoddard, F., Maalouf, F., Ogbonnaya, F. C., Link, W., Thomas, J. and O'Sullivan, D. M. (2015) A SNP-based consensus genetic map for synteny-based trait targeting in faba bean (Vicia faba L.). Plant Biotechnology Journal. ISSN 1467-7652 (In Press)
Map NV13 x Memphis
Linkage Group 1
Chromosome unknown
cM position 274.478
Assay ID
Assay Name Vf_Mt5g011550_001
Reference Allele Sequences
Sequence ID Allele Phenotype
A:A resistant
G:G susceptible
Polymorphism sequence GGTACTAATCTGGCTAACAAGTTTTTGCGAGCGAATGGAGTTACACTTTTCAAGG
TGCGAGATGAAATTGTTAATGTGCTTGGAGAAGCTGATAT[R]TTTACAGTATGC
CCTGAGCGTCCTCCAATGACTGAAGATGCTCAGAAGGCCCTTGATTGGGCTGTTG
ATAAAAANTTAAAATC
Reference allele sequence alignment
Validation plot
Genotype data