NIAB - National Institute of Agricultural Botany

Assay information: Vf_Mt5g014410_001

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Narrative N-acetylornithine deacetylase-like protein (Fragment) (AHRD V1 ***- O49682_ARATH); contains Interpro domain(s) IPR011650 Peptidase M20, dimerisation chr05_pseudomolecule_IMGAG_V3.5 4587465-4594883 E EGN_Mt100125 20100825
References Webb, A., Cottage, A., Wood, T., Khamassi, K., Hobbs, D., Gostkiewicz, K., White, M., Khazaei, H., Ali, M., Street, D., Duc, G., Stoddard, F., Maalouf, F., Ogbonnaya, F. C., Link, W., Thomas, J. and O'Sullivan, D. M. (2015) A SNP-based consensus genetic map for synteny-based trait targeting in faba bean (Vicia faba L.). Plant Biotechnology Journal. ISSN 1467-7652 (In Press)
Map NV13 x Memphis
Linkage Group 1
Chromosome unknown
cM position 264.638
Assay ID
Assay Name Vf_Mt5g014410_001
Reference Allele Sequences
Sequence ID Allele Phenotype
C:C resistant
A:A susceptible
Polymorphism sequence GACACGTTCAGAACAATCCACCGGAACTCATTCCCGAAGAAGACAAAGTAGTGAA
GCACCTGTTAAACTCCCTCTTACCCTTCAGCACCACCACCGG[M]GGCGGTCCCT
TAATCCTCAACCATGTCACCTATTTCCCCGGCAGAGGTAACCTCATCGTCGAGTA
CCCCGGAACCGTTCCCGGCAAGATCCTCTCCTTTG
Reference allele sequence alignment
Validation plot
Genotype data