NIAB - National Institute of Agricultural Botany

Assay information: Vf_Mt5g013980_001

Export assay as CSV

Narrative Vacuolar protein sorting-associated protein 55 homolog (AHRD V1 ***- Q9AST6); contains Interpro domain(s) IPR007262 Vacuolar protein sorting 55 chr05_pseudomolecule_IMGAG_V3.5 4363911-4361431 E EGN_Mt100125 20100825
References Webb, A., Cottage, A., Wood, T., Khamassi, K., Hobbs, D., Gostkiewicz, K., White, M., Khazaei, H., Ali, M., Street, D., Duc, G., Stoddard, F., Maalouf, F., Ogbonnaya, F. C., Link, W., Thomas, J. and O'Sullivan, D. M. (2015) A SNP-based consensus genetic map for synteny-based trait targeting in faba bean (Vicia faba L.). Plant Biotechnology Journal. ISSN 1467-7652 (In Press)
Map NV13 x Memphis
Linkage Group 1
Chromosome unknown
cM position 266.318
Assay ID
Assay Name Vf_Mt5g013980_001
Reference Allele Sequences
Sequence ID Allele Phenotype
C:C resistant
T:T susceptible
Polymorphism sequence TGATCGGTTGGGCAGCCTTTGCAATGGAACTCTCTTCTTTCTTTGTGTTTGTGTT
AGCCATATTGTGTTACCTGGGGATGAGTGAGGAAGATAGTTATTA[Y]AGTATGC
TATGAAACAGGAGTTCAGTAAGGCTTGATTCATTTGTGTAAAANTGTATCTGTTC
CTTTTGTGTGCTGTTGATTTCTT
Reference allele sequence alignment
Validation plot
Genotype data