NIAB - National Institute of Agricultural Botany

Assay information: Vf_Mt5g076620_001

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Narrative Phytoene synthase (Fragment) (AHRD V1 **** Q5ISE0_9MAGN); contains Interpro domain(s) IPR008949 Terpenoid synthase chr05_pseudomolecule_IMGAG_V3.5 31691115-31686616 E EGN_Mt100125 20100825
References Webb, A., Cottage, A., Wood, T., Khamassi, K., Hobbs, D., Gostkiewicz, K., White, M., Khazaei, H., Ali, M., Street, D., Duc, G., Stoddard, F., Maalouf, F., Ogbonnaya, F. C., Link, W., Thomas, J. and O'Sullivan, D. M. (2015) A SNP-based consensus genetic map for synteny-based trait targeting in faba bean (Vicia faba L.). Plant Biotechnology Journal. ISSN 1467-7652 (In Press)
Map NV13 x Memphis
Linkage Group 1
Chromosome unknown
cM position 157.083
Assay ID
Assay Name Vf_Mt5g076620_001
Reference Allele Sequences
Sequence ID Allele Phenotype
T:T resistant
A:A susceptible
Polymorphism sequence GTCATGTCTGTGACATTATTACGAGTTGCTTCTTCCCCTAGCTTAGAGGTATCCA
ATTCGACYGGTTTACTTGATTCTTTCGGGGTTGTGAAGGTTGTAG[W]TTCGTCA
AGGTTCTTGTGTAGGGACTTTGTGTCAGTTAGAGCGAAAAAGA
Reference allele sequence alignment
Validation plot
Genotype data