NIAB - National Institute of Agricultural Botany

Assay information: Vf_Mt5g078030_001

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Narrative Cysteine-rich repeat secretory protein 60 (AHRD V1 ***- Q0WPN8); contains Interpro domain(s) IPR002902 Protein of unknown function DUF26 chr05_pseudomolecule_IMGAG_V3.5 32327961-32330165 E EGN_Mt100125 20100825
References Webb, A., Cottage, A., Wood, T., Khamassi, K., Hobbs, D., Gostkiewicz, K., White, M., Khazaei, H., Ali, M., Street, D., Duc, G., Stoddard, F., Maalouf, F., Ogbonnaya, F. C., Link, W., Thomas, J. and O'Sullivan, D. M. (2015) A SNP-based consensus genetic map for synteny-based trait targeting in faba bean (Vicia faba L.). Plant Biotechnology Journal. ISSN 1467-7652 (In Press)
Map NV13 x Memphis
Linkage Group 1
Chromosome unknown
cM position 155.587
Assay ID
Assay Name Vf_Mt5g078030_001
Reference Allele Sequences
Sequence ID Allele Phenotype
G:G resistant
C:C susceptible
Polymorphism sequence TGCCTGACTGCGCGTCCTGCGTGGCACGCGCAGTCACGCGGGCGGACGACATGTG
TCGCAACACATGCGGAGGCACGGTCCAGCTCGACGGGTGTTTGGT[S]AAGTACG
ATAATGCTACTTTTTTGGGTGTGGAGGATAAGAATGTTTTGTTGAAAAAGTGCGG
GCCTTCCGTGGGCTATAATCCGGAAGCTATGGGCTC
Reference allele sequence alignment
Validation plot
Genotype data